MolNFT v1 · #180258 · protein
Cryo-EM structure of saccharomyces cerevisiae er membrane protein complex bound to a Fab in ddm detergent
7KTX: “Cryo-EM structure of saccharomyces cerevisiae er membrane protein complex bound to a Fab in ddm detergent”. Electron microscopy, 1 ligand (NAG). MolNFT v1 #180258 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7KTX
- Type
- protein
- Length
- 2,171 residues
- Chains
- 12
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P25574, P47133, P36039, P53073, P40540, Q12431, P39543, Q12025
- Ligands
- NAG
Structure
electron microscopy · 12 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 681 | — | P25574 |
| B | — | protein | 290 | — | P47133 |
| C | — | protein | 198 | — | P36039 |
| D | — | protein | 74 | — | P53073 |
| E | — | protein | 133 | — | P40540 |
| F | — | protein | 97 | — | Q12431 |
| G | — | protein | 151 | — | P39543 |
| H | — | protein | 123 | — | Q12025 |
| I | — | protein | 170 | — | — |
| J | — | protein | 209 | — | — |
| M | — | protein | 21 | — | — |
| N | — | protein | 24 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 6 copies · chains A, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7KTX · Cryo-EM structure of Saccharomyces cerevisiae ER membrane protein complex bound to a Fab… · the same entry in another collection · chain N against N, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25574
- Every structure of UniProt P47133
- Every structure of UniProt P36039
- Every structure of UniProt P53073
- Every structure of UniProt P40540
- Every structure of UniProt Q12431
- Every structure of UniProt P39543
- Every structure of UniProt Q12025
- Elsewhere: RCSB PDB 7KTX · PDBe 7KTX · UniProt P25574 · UniProt P47133 · UniProt P36039 · UniProt P53073 · UniProt P40540 · UniProt Q12431 · UniProt P39543 · UniProt Q12025
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.