MolNFT v1 · #179920 · protein + RNA
Structure of HIV-1 reverse transcriptase initiation complex core with nevirapine
7KJX: “Structure of HIV-1 reverse transcriptase initiation complex core with nevirapine”. Electron microscopy, 2 ligands (NVP, MG). MolNFT v1 #179920 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7KJX
- Type
- protein + RNA
- Length
- 992 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P03366
- Ligands
- NVP, MG
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 545 | — | P03366 |
| B | — | protein | 403 | — | P03366 |
| C | — | rna | 22 | — | — |
| D | — | rna | 22 | — | — |
Ligands and binding sites
- NVP · 11-cyclopropyl-5,11-dihydro-4-methyl-6H-dipyrido[3,2-B:2',3'-e][1,4]diazepin-6-one · ligand · chains A
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7KJX · Structure of HIV-1 reverse transcriptase initiation complex core with nevirapine · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03366
- Elsewhere: RCSB PDB 7KJX · PDBe 7KJX · UniProt P03366
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.