MolNFT v1 · #179533 · protein
Crystal structure of bovine RPE65 in complex with 4-fluoro-mb-004 and palmitate
7K8G: “Crystal structure of bovine RPE65 in complex with 4-fluoro-mb-004 and palmitate”. X-ray diffraction, 3 ligands (PLM, W9A, FE2). MolNFT v1 #179533 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7K8G
- Type
- protein
- Length
- 1,001 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q28175
- Ligands
- PLM, W9A, FE2
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 499 | — | Q28175 |
| B | — | protein | 502 | — | Q28175 |
Ligands and binding sites
- PLM · Palmitic acid · ligand · 2 copies · chains A, B
- W9A · (1R)-3-amino-1-{4-fluoro-3-[(2-propylpentyl) oxy]phenyl}propan-1-ol · ligand · 2 copies · chains A, B
- FE2 · Fe (II) ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7K8G · Crystal structure of bovine RPE65 in complex with 4-fluoro-MB-004 and palmitate · the same entry in another collection · chain A against A, TM-score 1.00
- Q28175 · AlphaFold monomer V2.0 prediction for retinoid isomerohydrolase (Q28175) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q28175
- Elsewhere: RCSB PDB 7K8G · PDBe 7K8G · UniProt Q28175
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