MolNFT v1 · #179514 · protein
The X-ray crystal structure of SSR4, an S. pombe chromatin remodelling protein: iodide derivative
7K7V · SWI/SNF and rsc complexes subunit SSR4: “The X-ray crystal structure of SSR4, an S. pombe chromatin remodelling protein: iodide derivative”. X-ray diffraction, 2 ligands (CL, IOD), 2 pockets (best druggability 0.61). MolNFT v1…
- PDB
- 7K7V
- Type
- protein
- Length
- 192 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- SWI/SNF and rsc complexes subunit SSR4
- UniProt
- Q9P7Y0
- Ligands
- CL, IOD
- Pockets
- 2 · best druggability 0.61
Structure
x-ray diffraction · 1 distinct chain · 22% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SWI/SNF and rsc complexes subunit SSR4 | protein | 192 | 22% helix, 30% strand | Q9P7Y0 |
Ligands and binding sites
- CL · Chloride ion · ion · 4 copies · chains A
- IOD · Iodide ion · ion · 2 copies · chains A
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 213 | 0.61 | 0.81 | 24 | GOL |
| 2 | 131 | 0.41 | 0.75 | 27 | empty |
Compared structures
- 7K7V · The X-ray crystal structure of SSR4, an S. pombe chromatin remodelling protein: iodide… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9P7Y0 · AlphaFold monomer V2.0 prediction for SWI/SNF and rsc complexes subunit SSR4 (Q9P7Y0) · a predicted model of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9P7Y0
- Elsewhere: RCSB PDB 7K7V · PDBe 7K7V · UniProt Q9P7Y0
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