MolNFT v1 · #179063 · protein
X-ray structure of mmp-13 in complex with 4-(1,2,3-thiadiazol-4-yl) pyridine
7JU8: “X-ray structure of mmp-13 in complex with 4-(1,2,3-thiadiazol-4-yl) pyridine”. X-ray diffraction, 3 ligands (9DY, ZN, CA). MolNFT v1 #179063 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7JU8
- Type
- protein
- Length
- 333 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P45452
- Ligands
- 9DY, ZN, CA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 167 | — | P45452 |
| B | — | protein | 166 | — | P45452 |
Ligands and binding sites
- 9DY · 4-(1,2,3-thiadiazol-4-yl)pyridine · ligand · 2 copies · chains A, B
- ZN · Zinc ion · metal · 4 copies · chains A, B
- CA · Calcium ion · metal · 4 copies · chains A, B
- FMT · Formic acid · additive · 11 copies · chains A, B
- PGE · Triethylene glycol · additive · chains A
- PG4 · Tetraethylene glycol · additive · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7JU8 · X-ray structure of MMP-13 in Complex with 4-(1,2,3-thiadiazol-4-yl)pyridine · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P45452
- Elsewhere: RCSB PDB 7JU8 · PDBe 7JU8 · UniProt P45452
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