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MolNFT v1 · #178937 · protein + RNA

SARS-cov-2 NSP1 and rabbit 40S ribosome complex

7JQB: “SARS-cov-2 NSP1 and rabbit 40S ribosome complex”. Electron microscopy. MolNFT v1 #178937 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7JQB
Type
protein + RNA
Length
6,556 residues
Chains
34
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
G1TDB3, G1TLT8, G1TFE8, G1SS70, G1TIB4, G1TNM3, G1T8A2, G1TFM5, G1SK22, G1TM55, G1SJB4, G1SVB0, G1TJW1, B7NZS8, G1TPV3, G1SFR8, G1U0Q2, G1SGX4, G1TU13, G1TPG3, G1TN62, G1SIZ2, G1TM82, A0A5F9CBF4, P0DTD1, G1TK17, G1TRM4, G1SP51, G1U472, G1TG89, G1SZ47, G1TZ76

Structure

electron microscopy · 34 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—rna1697——
a—protein75—G1TDB3
B—protein217—G1TLT8
b—protein101—G1TFE8
C—protein213—G1SS70
D—protein221——
d—protein62—G1TIB4
E—protein228—G1TNM3
f—protein57—G1T8A2
G—protein185—G1TFM5
g—protein68—G1SK22
H—protein237—G1TM55
h—protein313—G1SJB4
I—protein185—G1SVB0
J—protein206—G1TJW1
K—protein185—B7NZS8
L—protein96—G1TPV3
N—protein117—G1SFR8
Q—protein129—G1U0Q2
R—protein142—G1SGX4
S—protein132—G1TU13
T—protein144—G1TPG3
U—protein141—G1TN62
V—protein100—G1SIZ2
W—protein83—G1TM82
Z—protein124—A0A5F9CBF4
F—protein36—P0DTD1
M—protein263—G1TK17
O—protein158—G1TRM4
P—protein150—G1SP51
X—protein136—G1U472
Y—protein129—G1TG89
c—protein142—G1SZ47
e—protein84—G1TZ76

Compared structures

  • 7JQB · SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex · the same entry in another collection · chain a against a, TM-score 1.00

Analyse

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