MolNFT v1 · #178701 · protein
GTP-specific succinyl-CoA synthetase complexed with mg-gmppcp
7JJ0: “GTP-specific succinyl-CoA synthetase complexed with mg-gmppcp”. X-ray diffraction, 2 ligands (GCP, MG). MolNFT v1 #178701 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7JJ0
- Type
- protein
- Length
- 1,368 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O19069, P53590
- Ligands
- GCP, MG
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 296 | — | O19069 |
| B | — | protein | 393 | — | P53590 |
| C | — | protein | 297 | — | O19069 |
| D | — | protein | 382 | — | P53590 |
Ligands and binding sites
- GCP · Phosphomethylphosphonic acid guanylate ester · ligand · chains A, B
- MG · Magnesium ion · metal · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7JJ0 · GTP-specific succinyl-CoA synthetase complexed with Mg-GMPPCP · the same entry in another collection · chain D against D, TM-score 1.00
- O19069 · AlphaFold monomer V2.0 prediction for succinate--CoA ligase [ADP/GDP- forming] subunit… · a predicted model of the same protein · chain C against A, TM-score 0.98
- P53590 · AlphaFold monomer V2.0 prediction for succinate--CoA ligase [GDP- forming] subunit beta… · a predicted model of the same protein · chain B against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O19069
- Every structure of UniProt P53590
- Elsewhere: RCSB PDB 7JJ0 · PDBe 7JJ0 · UniProt O19069 · UniProt P53590
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