MolNFT v1 · #178665 · protein
Crystal structure of the carbohydrate-binding domain VP8* of human P[8] rotavirus strain BM13851 in complex with lndfh I
7JHZ: “Crystal structure of the carbohydrate-binding domain VP8* of human P[8] rotavirus strain BM13851 in complex…”. X-ray diffraction, 4 ligands (GAL, FUC, NAG). MolNFT v1 #178665 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7JHZ
- Type
- protein
- Length
- 449 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- M4VPJ0
- Ligands
- GAL, FUC, NAG, BGC
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 148 | — | M4VPJ0 |
| B | — | protein | 151 | — | M4VPJ0 |
| C | — | protein | 150 | — | M4VPJ0 |
Ligands and binding sites
- GAL · beta-D-galactopyranose · sugar · 4 copies · chains C, A
- FUC · alpha-L-fucopyranose · sugar · 4 copies · chains C, A
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains C, A
- BGC · beta-D-glucopyranose · sugar · chains C
- GOL · Glycerol · additive · 2 copies · chains B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7JHZ · Crystal structure of the carbohydrate-binding domain VP8* of human P[8] rotavirus strain… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt M4VPJ0
- Elsewhere: RCSB PDB 7JHZ · PDBe 7JHZ · UniProt M4VPJ0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.