MolNFT v1 · #178650 · protein
Structure of human beta 1,3-N-acetylglucosaminyltransferase 2 in unliganded form
7JHK: “Structure of human beta 1,3-N-acetylglucosaminyltransferase 2 in unliganded form”. X-ray diffraction, 5 ligands (NAG, BMA, MAN). MolNFT v1 #178650 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7JHK
- Type
- protein
- Length
- 1,315 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9NY97
- Ligands
- NAG, BMA, MAN, NA, CL
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 323 | — | Q9NY97 |
| B, C | — | protein | 331 | — | Q9NY97 |
| D | — | protein | 330 | — | Q9NY97 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 15 copies · chains A, B, C, D
- BMA · beta-D-mannopyranose · sugar · 4 copies · chains A, B, C, D
- MAN · alpha-D-mannopyranose · sugar · 4 copies · chains B, D
- NA · Sodium ion · metal · chains C
- CL · Chloride ion · ion · 6 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7JHK · Structure of human beta 1,3-N-acetylglucosaminyltransferase 2 in unliganded form · the same entry in another collection · chain D against D, TM-score 1.00
- Q9NY97 · AlphaFold monomer V2.0 prediction for N-acetyllactosaminide… · a predicted model of the same protein · chain B against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NY97
- Elsewhere: RCSB PDB 7JHK · PDBe 7JHK · UniProt Q9NY97
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.