MolNFT v1 · #178521 · protein
The crystal structure of beta-1,2-mannobiose phosphorylase in complex with 1,4-mannobiose
7FIR: “The crystal structure of beta-1,2-mannobiose phosphorylase in complex with 1,4-mannobiose”. X-ray diffraction, 3 ligands (Z2D, GUP, ZN). MolNFT v1 #178521 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7FIR
- Type
- protein
- Length
- 1,209 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B0K2C3
- Ligands
- Z2D, GUP, ZN
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 302 | — | B0K2C3 |
| C | — | protein | 304 | — | B0K2C3 |
| D | — | protein | 301 | — | B0K2C3 |
Ligands and binding sites
- Z2D · alpha-L-allopyranose · ligand · 4 copies · chains A, B, C, D
- GUP · alpha-L-gulopyranose · ligand · 4 copies · chains A, B, C, D
- ZN · Zinc ion · metal · 17 copies · chains A, B, D, C
- PGE · Triethylene glycol · additive · chains A
- 1PE · Pentaethylene glycol · additive · chains C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7FIR · The crystal structure of beta-1,2-mannobiose phosphorylase in complex with 1,4-mannobiose · the same entry in another collection · chain D against D, TM-score 1.00
- B0K2C3 · AlphaFold monomer V2.0 prediction for beta-1,2-mannobiose phosphorylase (B0K2C3) · a predicted model of the same protein · chain D against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0K2C3
- Elsewhere: RCSB PDB 7FIR · PDBe 7FIR · UniProt B0K2C3
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