MolNFT v1 · #178457 · protein

Toxoplasma gondii dihydrofolate reductase thymidylate synthase (tgdhfr-ts) complexed with pyrimethamine, NADPH and dump

7FGW: “Toxoplasma gondii dihydrofolate reductase thymidylate synthase (tgdhfr-ts) complexed with pyrimethamine…”. X-ray diffraction, 4 ligands (NDP, CP6, UMP). MolNFT v1 #178457 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7FGW
Type: protein
Length: 2,233 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q07422
Ligands: NDP, CP6, UMP, BEN

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	558	—	Q07422
B	—	protein	560	—	Q07422
C	—	protein	556	—	Q07422
D	—	protein	559	—	Q07422

Ligands and binding sites

NDP · Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate · ligand · 4 copies · chains A, B, C, D
CP6 · 5-(4-chloro-phenyl)-6-ethyl-pyrimidine-2,4-diamine · ligand · 4 copies · chains A, B, C, D
UMP · 2'-deoxyuridine 5'-monophosphate · ligand · 4 copies · chains A, B, C, D
BEN · Benzamidine · ligand · 2 copies · chains A, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7FGW · Toxoplasma gondii dihydrofolate reductase thymidylate synthase (TgDHFR-TS) complexed with… · the same entry in another collection · chain D against D, TM-score 1.00
Q07422 · AlphaFold monomer V2.0 prediction for bifunctional dihydrofolate reductase-thymidylate… · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q07422
Elsewhere: RCSB PDB 7FGW · PDBe 7FGW · UniProt Q07422

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