MolNFT v1 · #178185 · protein
Crystal structure of glutamate dehydrogenase 3 from candida albicans in complex with alpha-ketoglutarate and NADPH
7F79: “Crystal structure of glutamate dehydrogenase 3 from candida albicans in complex with alpha-ketoglutarate and…”. X-ray diffraction, 2 ligands (NDP, AKG). MolNFT v1 #178185 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7F79
- Type
- protein
- Length
- 2,723 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A1D8PMH8
- Ligands
- NDP, AKG
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 456 | — | A0A1D8PMH8 |
| B | — | protein | 452 | — | A0A1D8PMH8 |
| C | — | protein | 458 | — | A0A1D8PMH8 |
| D | — | protein | 454 | — | A0A1D8PMH8 |
| E | — | protein | 448 | — | A0A1D8PMH8 |
| F | — | protein | 455 | — | A0A1D8PMH8 |
Ligands and binding sites
- NDP · Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate · ligand · 6 copies · chains A, B, C, D, E, F
- AKG · 2-oxoglutaric acid · ligand · 6 copies · chains A, B, C, D, E, F
- GOL · Glycerol · additive · 5 copies · chains A, B, D, F, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7F79 · Crystal structure of glutamate dehydrogenase 3 from Candida albicans in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1D8PMH8
- Elsewhere: RCSB PDB 7F79 · PDBe 7F79 · UniProt A0A1D8PMH8
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