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MolNFT v1 · #177699 · protein

Crystal structure of capsid P domain of norovirus GI.3 dsv complexed with NA2 N-glycan

7EQW: “Crystal structure of capsid P domain of norovirus GI.3 dsv complexed with NA2 N-glycan”. X-ray diffraction, 3 ligands (MAN, NAG, GAL). MolNFT v1 #177699 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7EQW
Type
protein
Length
600 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Ligands
MAN, NAG, GAL

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein304——
B—protein296——

Ligands and binding sites

  • MAN · alpha-D-mannopyranose · sugar
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar
  • GAL · beta-D-galactopyranose · sugar · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7EQW · Crystal structure of capsid P domain of norovirus GI.3 DSV complexed with NA2 N-glycan · the same entry in another collection · chain B against B, TM-score 1.00

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