MolNFT v1 · #177666 · protein
Ketosteroid isomerase ksi with 5-nitrobenzoxazole (5NBI)
7EPO · Snoal-like domain-containing protein: “Ketosteroid isomerase ksi with 5-nitrobenzoxazole (5NBI)”. X-ray diffraction, 1 ligand (H5J), 1 pocket (best druggability 0.72). MolNFT v1 #177666 on GenesisL1: 3D structure, binding sites and…
- PDB
- 7EPO
- Type
- protein
- Length
- 130 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Snoal-like domain-containing protein
- UniProt
- I7FVV8
- Ligands
- H5J
- Pockets
- 1 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 32% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Snoal-like domain-containing protein | protein | 130 | 32% helix, 41% strand | I7FVV8 |
Ligands and binding sites
- H5J · 5-nitro-1,2-benzoxazole · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 308 | 0.72 | 0.85 | 33 | H5J |
Compared structures
- 7EPO · Ketosteroid Isomerase KSI with 5-nitrobenzoxazole (5NBI) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt I7FVV8
- Elsewhere: RCSB PDB 7EPO · PDBe 7EPO · UniProt I7FVV8
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