MolNFT v1 · #177449 · protein
Heterotetrameric glycyl-tRNA synthetase from escherichia COLI
7EIV: “Heterotetrameric glycyl-tRNA synthetase from escherichia COLI”. X-ray diffraction, 2 ligands (ANP, MG). MolNFT v1 #177449 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7EIV
- Type
- protein
- Length
- 1,703 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P00960, P00961
- Ligands
- ANP, MG
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 300 | — | P00960 |
| B | — | protein | 301 | — | P00960 |
| C | — | protein | 535 | — | P00961 |
| D | — | protein | 567 | — | P00961 |
Ligands and binding sites
- ANP · Phosphoaminophosphonic acid-adenylate ester · ligand · 2 copies · chains A, B
- MG · Magnesium ion · metal · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7EIV · heterotetrameric glycyl-tRNA synthetase from Escherichia coli · the same entry in another collection · chain D against D, TM-score 1.00
- P00960 · AlphaFold monomer V2.0 prediction for glycine--tRNA ligase alpha subunit (P00960) · a predicted model of the same protein · chain A against A, TM-score 0.98
- P00961 · AlphaFold monomer V2.0 prediction for glycine--tRNA ligase beta subunit (P00961) · a predicted model of the same protein · chain C against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00960
- Every structure of UniProt P00961
- Elsewhere: RCSB PDB 7EIV · PDBe 7EIV · UniProt P00960 · UniProt P00961
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