MolNFT v1 · #177334 · protein + DNA
Crystal structure of mouse mutyh in complex with DNA containing ap site ANALOGUE:8-oxog (form I)
7EF8: “Crystal structure of mouse mutyh in complex with DNA containing ap site ANALOGUE:8-oxog (form I)”. X-ray diffraction, 3 ligands (SF4, ZN, SO4). MolNFT v1 #177334 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7EF8
- Type
- protein + DNA
- Length
- 427 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q99P21
- Ligands
- SF4, ZN, SO4
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 402 | — | Q99P21 |
| B | — | dna | 13 | — | — |
| C | — | dna | 12 | — | — |
Ligands and binding sites
- SF4 · Iron/sulfur cluster · ligand · chains A
- ZN · Zinc ion · metal · chains A
- SO4 · Sulfate ion · ion · 7 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7EF8 · Crystal structure of mouse MUTYH in complex with DNA containing AP site analogue:8-oxoG… · the same entry in another collection · chain A against A, TM-score 1.00
- Q99P21 · AlphaFold monomer V2.0 prediction for adenine DNA glycosylase (Q99P21) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q99P21
- Elsewhere: RCSB PDB 7EF8 · PDBe 7EF8 · UniProt Q99P21
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