MolNFT v1 · #177288 · RNA

Crystal structure of the eukaryotic decoding site in complex with AG(I)

7EDN: “Crystal structure of the eukaryotic decoding site in complex with AG(I)”. X-ray diffraction, 2 ligands (AG, CA). MolNFT v1 #177288 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7EDN
Type: RNA
Length: 22 nucleotides
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Ligands: AG, CA

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	rna	22	—	—

Ligands and binding sites

AG · Silver ion · metal · 2 copies · chains A
CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7EDN · Crystal structure of the eukaryotic decoding site in complex with Ag(I) · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 7EDN · PDBe 7EDN

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