MolNFT v1 · #176485 · protein
Crystal structure of zika NS2B-NS3 protease with compound 5
7DOC: “Crystal structure of zika NS2B-NS3 protease with compound 5”. X-ray diffraction, 1 ligand (HHC). MolNFT v1 #176485 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7DOC
- Type
- protein
- Length
- 769 residues
- Chains
- 9
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A2R4LVW1, A0A142IX72, Q32ZE1, H8XX12
- Ligands
- HHC
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, G | — | protein | 39 | — | A0A2R4LVW1 |
| B | — | protein | 153 | — | A0A142IX72 |
| C | — | protein | 38 | — | Q32ZE1 |
| D | — | protein | 152 | — | A0A142IX72 |
| E | — | protein | 39 | — | Q32ZE1 |
| F | — | protein | 152 | — | A0A142IX72 |
| H | — | protein | 153 | — | H8XX12 |
| I | — | protein | 4 | — | — |
Ligands and binding sites
- HHC · ~{N}-[(2~{R})-2,3-bis(azanyl)-3-oxidanylidene-propyl]-2-[(4~{R})-4-methanoyl-4,5-dihydro-1,3-thiazol-2-yl]pyridine-4-carboxamide · ligand · chains A, B, I
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7DOC · Crystal structure of Zika NS2B-NS3 protease with compound 5 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A2R4LVW1
- Every structure of UniProt A0A142IX72
- Every structure of UniProt Q32ZE1
- Every structure of UniProt H8XX12
- Elsewhere: RCSB PDB 7DOC · PDBe 7DOC · UniProt A0A2R4LVW1 · UniProt A0A142IX72 · UniProt Q32ZE1 · UniProt H8XX12
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