MolNFT v1 · #176467 · protein
Crystal structure of the AGCARB2-C2 complex with homoorientin
7DNN: “Crystal structure of the AGCARB2-C2 complex with homoorientin”. X-ray diffraction, 3 ligands (H9R, MN, IOD). MolNFT v1 #176467 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7DNN
- Type
- protein
- Length
- 934 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- H0QPL9, H0QPL8
- Ligands
- H9R, MN, IOD
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, P | — | protein | 336 | — | H0QPL9 |
| B, Q | — | protein | 131 | — | H0QPL8 |
Ligands and binding sites
- H9R · 2-[3,4-bis(oxidanyl)phenyl]-6-[(2S,3R,4R,5S,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]-5,7-bis(oxidanyl)chromen-4-one · ligand · chains A, B
- MN · Manganese (II) ion · metal · 2 copies · chains A, P
- IOD · Iodide ion · ion · 2 copies · chains A, B, P, Q
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7DNN · Crystal structure of the AgCarB2-C2 complex with homoorientin · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt H0QPL9
- Every structure of UniProt H0QPL8
- Elsewhere: RCSB PDB 7DNN · PDBe 7DNN · UniProt H0QPL9 · UniProt H0QPL8
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