MolNFT v1 · #176337 · protein
Crystal structure of lymnaea stagnalis acetylcholine binding protein (achbp) complexed with paraherquamide a
7DJI: “Crystal structure of lymnaea stagnalis acetylcholine binding protein (achbp) complexed with paraherquamide a”. X-ray diffraction, 2 ligands (H8U, NAG). MolNFT v1 #176337 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7DJI
- Type
- protein
- Length
- 1,026 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P58154
- Ligands
- H8U, NAG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, D, E | — | protein | 205 | — | P58154 |
| B | — | protein | 206 | — | P58154 |
Ligands and binding sites
- H8U · Paraherquamide A · ligand · 5 copies · chains A, B, C, D, E
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 5 copies · chains A, B, C, D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7DJI · Crystal structure of Lymnaea stagnalis Acetylcholine binding protein (AChBP) complexed… · the same entry in another collection · chain E against E, TM-score 1.00
- P58154 · AlphaFold monomer V2.0 prediction for acetylcholine-binding protein (P58154) · a predicted model of the same protein · chain E against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P58154
- Elsewhere: RCSB PDB 7DJI · PDBe 7DJI · UniProt P58154
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