MolNFT v1 · #175860 · protein + DNA
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
7D3X: “Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by…”. Solution nmr, 1 ligand (ZN). MolNFT v1 #175860 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7D3X
- Type
- protein + DNA
- Length
- 209 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P31941
- Ligands
- ZN
Structure
solution nmr · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 199 | — | P31941 |
| B | — | dna | 10 | — | — |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7D3X · Non-specific and specific interactions work cooperatively to promote cytidine deamination… · the same entry in another collection · chain A against A, TM-score 1.00
- P31941 · AlphaFold monomer V2.0 prediction for DNA dc->du-editing enzyme apobec-3A (P31941) · a predicted model of the same protein · chain A against A, TM-score 0.83
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P31941
- Elsewhere: RCSB PDB 7D3X · PDBe 7D3X · UniProt P31941
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