MolNFT v1 · #17582 · protein

Crystal structure of glcv, the ABC-ATPase of the glucose ABC transporter from sulfolobus solfataricus

1OXX · ABC transporter, ATP binding protein: “Crystal structure of glcv, the ABC-ATPase of the glucose ABC transporter from sulfolobus solfataricus”. X-ray diffraction, 1 ligand (IOD), 2 pockets (best druggability 0.48). MolNFT v1 #17582…

PDB: 1OXX
Type: protein
Length: 352 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: ABC transporter, ATP binding protein
UniProt: Q97UY8
Ligands: IOD
Pockets: 2 · best druggability 0.48

Structure

x-ray diffraction · 1 distinct chain · 30% helix, 37% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
K	ABC transporter, ATP binding protein	protein	352	30% helix, 37% strand	Q97UY8

Ligands and binding sites

IOD · Iodide ion · ion · 32 copies · chains K

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	77	0.48	0.83	20	empty
2	111	0.43	0.77	18	IOD

Compared structures

1OXX · Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus… · the same entry in another collection · chain K against K, TM-score 1.00
Q97UY8 · AlphaFold monomer V2.0 prediction for glucose import ATP-binding protein glcv (Q97UY8) · a predicted model of the same protein · chain K against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q97UY8
Elsewhere: RCSB PDB 1OXX · PDBe 1OXX · UniProt Q97UY8

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