MolNFT v1 · #175104 · protein
The overall structure of nucleotide free mlafedb complex
7CGE: “The overall structure of nucleotide free mlafedb complex”. Electron microscopy, 1 ligand (PGW). MolNFT v1 #175104 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7CGE
- Type
- protein
- Length
- 2,092 residues
- Chains
- 12
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A4S5B3V0, A0A4V3YUQ9, A0A4S5B5E3, A0A6D2XU65
- Ligands
- PGW
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, D | — | protein | 257 | — | A0A4S5B3V0 |
| B, E | — | protein | 263 | — | A0A4V3YUQ9 |
| C, F | — | protein | 94 | — | A0A4S5B5E3 |
| G, H, I, J, K, L | — | protein | 144 | — | A0A6D2XU65 |
Ligands and binding sites
- PGW · (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate · ligand · 12 copies · chains A, D, H, G, K, L, I, J
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7CGE · The overall structure of nucleotide free MlaFEDB complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A4S5B3V0
- Every structure of UniProt A0A4V3YUQ9
- Every structure of UniProt A0A4S5B5E3
- Every structure of UniProt A0A6D2XU65
- Elsewhere: RCSB PDB 7CGE · PDBe 7CGE · UniProt A0A4S5B3V0 · UniProt A0A4V3YUQ9 · UniProt A0A4S5B5E3 · UniProt A0A6D2XU65
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