MolNFT v1 · #174901 · protein
Crystal structure of dihydroorotase in complex with plumbagin from saccharomyces cerevisiae
7CA1: “Crystal structure of dihydroorotase in complex with plumbagin from saccharomyces cerevisiae”. X-ray diffraction, 3 ligands (LMR, 90R, ZN). MolNFT v1 #174901 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7CA1
- Type
- protein
- Length
- 1,456 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P20051
- Ligands
- LMR, 90R, ZN
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, B, D | — | protein | 364 | — | P20051 |
Ligands and binding sites
- LMR · (2S)-2-hydroxybutanedioic acid · ligand · 2 copies · chains A, B
- 90R · 5-hydroxy-2-methylnaphthalene-1,4-dione · ligand · 2 copies · chains C, D
- ZN · Zinc ion · metal · 8 copies · chains A, C, B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7CA1 · Crystal structure of dihydroorotase in complex with plumbagin from Saccharomyces… · the same entry in another collection · chain A against A, TM-score 1.00
- P20051 · AlphaFold monomer V2.0 prediction for dihydroorotase (P20051) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P20051
- Elsewhere: RCSB PDB 7CA1 · PDBe 7CA1 · UniProt P20051
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