MolNFT v1 · #174569 · protein
The discovery of benzhydrol-oxaborole hybrid derivatives as leucyl- tRNA synthetase inhibitors
7BZJ: “The discovery of benzhydrol-oxaborole hybrid derivatives as leucyl- tRNA synthetase inhibitors”. X-ray diffraction, 1 ligand (FGX). MolNFT v1 #174569 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7BZJ
- Type
- protein
- Length
- 183 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B8ZKS5
- Ligands
- FGX
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 183 | — | B8ZKS5 |
Ligands and binding sites
- FGX · [(1~{R},5~{R},6~{S},8~{R})-8-(6-aminopurin-9-yl)-4'-[(~{R})-oxidanyl-[4-(2-oxidanylidenepropylsulfanyl) phenyl]methyl]spiro[2,4,7-trioxa-3-boranuidabicyclo[3.3.0]octane-3,7'-7-boranuidabicyclo[4.3.0]nona-1(6),2,4-triene]-6-yl]methoxy-tris(oxidanyl)phosphanium · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7BZJ · The Discovery of Benzhydrol-Oxaborole Hybrid Derivatives as Leucyl-tRNA Synthetase… · the same entry in another collection · chain A against A, TM-score 1.00
- B8ZKS5 · AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (B8ZKS5) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8ZKS5
- Elsewhere: RCSB PDB 7BZJ · PDBe 7BZJ · UniProt B8ZKS5
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