MolNFT v1 · #174087 · protein
Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (heterodisulfide reductase core and mobile arm in conformational state 2, composite structure)
7BKE: “Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from…”. Electron microscopy, 4 ligands (SF4, 9S8, FAD). MolNFT v1 #174087 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7BKE
- Type
- protein
- Length
- 3,176 residues
- Chains
- 9
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q2FKZ1, Q2FKZ3, Q2FKZ2, Q2FKZ0, Q2FME3, Q2FRK1
- Ligands
- SF4, 9S8, FAD, FES
Structure
electron microscopy · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 447 | — | Q2FKZ1 |
| C, c | — | protein | 189 | — | Q2FKZ3 |
| B, b | — | protein | 296 | — | Q2FKZ2 |
| a | — | protein | 662 | — | Q2FKZ1 |
| F | — | protein | 137 | — | Q2FKZ0 |
| E | — | protein | 411 | — | Q2FME3 |
| D | — | protein | 549 | — | Q2FRK1 |
Ligands and binding sites
- SF4 · Iron/sulfur cluster · ligand · 18 copies · chains A, C, a, E, c, D
- 9S8 · Non-cubane [4Fe-4S]-cluster · ligand · 4 copies · chains C, B, c, b
- FAD · Flavin-adenine dinucleotide · ligand · 3 copies · chains A, a, E
- FES · Fe2/s2 (inorganic) cluster · ligand · chains F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7BKE · Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2FKZ1
- Every structure of UniProt Q2FKZ3
- Every structure of UniProt Q2FKZ2
- Every structure of UniProt Q2FKZ0
- Every structure of UniProt Q2FME3
- Every structure of UniProt Q2FRK1
- Elsewhere: RCSB PDB 7BKE · PDBe 7BKE · UniProt Q2FKZ1 · UniProt Q2FKZ3 · UniProt Q2FKZ2 · UniProt Q2FKZ0 · UniProt Q2FME3 · UniProt Q2FRK1
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