MolNFT v1 · #174041 · protein
Structure of a B12 binding lipoprotein from bacteroides thetaiotaomicron
7BIZ: “Structure of a B12 binding lipoprotein from bacteroides thetaiotaomicron”. X-ray diffraction, 3 ligands (CNC, CA, NA). MolNFT v1 #174041 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7BIZ
- Type
- protein
- Length
- 945 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0N7IAT3
- Ligands
- CNC, CA, NA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 478 | — | A0A0N7IAT3 |
| B | — | protein | 467 | — | A0A0N7IAT3 |
Ligands and binding sites
- CNC · Cyanocobalamin · ligand · 2 copies · chains A, B
- CA · Calcium ion · metal · 4 copies · chains A, B
- NA · Sodium ion · metal · 2 copies · chains A, B
- 15P · Polyethylene glycol (N=34) · additive · 3 copies · chains A, B
- MES · 2-(N-morpholino)-ethanesulfonic acid · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7BIZ · Structure of a B12 binding lipoprotein from Bacteroides thetaiotaomicron · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0N7IAT3
- Elsewhere: RCSB PDB 7BIZ · PDBe 7BIZ · UniProt A0A0N7IAT3
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