MolNFT v1 · #173816 · protein
Pectate lyase B from verticillium dahliae
7BBV: “Pectate lyase B from verticillium dahliae”. X-ray diffraction, 2 ligands (MAN, CA). MolNFT v1 #173816 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7BBV
- Type
- protein
- Length
- 596 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- G2X3Y1
- Ligands
- MAN, CA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 298 | — | G2X3Y1 |
Ligands and binding sites
- MAN · alpha-D-mannopyranose · sugar · 12 copies · chains A, B
- CA · Calcium ion · metal · 2 copies · chains A, B
- PEG · Di(hydroxyethyl)ether · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7BBV · Pectate lyase B from Verticillium dahliae · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G2X3Y1
- Elsewhere: RCSB PDB 7BBV · PDBe 7BBV · UniProt G2X3Y1
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