MolNFT v1 · #173185 · protein
Lolcde in complex with AMP-pnp in the closed nbd state
7ARK: “Lolcde in complex with AMP-pnp in the closed nbd state”. Electron microscopy, 2 ligands (ANP, MG). MolNFT v1 #173185 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7ARK
- Type
- protein
- Length
- 1,243 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A4S5ATA9, P75958, P75957
- Ligands
- ANP, MG
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C | — | protein | 386 | — | A0A4S5ATA9 |
| E | — | protein | 405 | — | P75958 |
| D, F | — | protein | 226 | — | P75957 |
Ligands and binding sites
- ANP · Phosphoaminophosphonic acid-adenylate ester · ligand · 2 copies · chains D, F, E
- MG · Magnesium ion · metal · 2 copies · chains D, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7ARK · LolCDE in complex with AMP-PNP in the closed NBD state · the same entry in another collection · chain C against C, TM-score 1.00
- P75957 · AlphaFold monomer V2.0 prediction for lipoprotein-releasing system ATP-binding protein… · a predicted model of the same protein · chain D against A, TM-score 0.89
- P75958 · AlphaFold monomer V2.0 prediction for lipoprotein-releasing system transmembrane protein… · a predicted model of the same protein · chain E against A, TM-score 0.74
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A4S5ATA9
- Every structure of UniProt P75958
- Every structure of UniProt P75957
- Elsewhere: RCSB PDB 7ARK · PDBe 7ARK · UniProt A0A4S5ATA9 · UniProt P75958 · UniProt P75957
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