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MolNFT v1 · #173163 · protein

NMR2 structure of BRD4-BD2 in complex with ibet-762

7AQT · Bromodomain-containing protein 4: “NMR2 structure of BRD4-BD2 in complex with ibet-762”. Solution nmr, 1 ligand (EAM), 1 pocket (best druggability 0.50). MolNFT v1 #173163 on GenesisL1: 3D structure, binding sites and pockets in…

PDB
7AQT
Type
protein
Length
109 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Bromodomain-containing protein 4
UniProt
O60885
Ligands
EAM
Pockets
1 · best druggability 0.50

Structure

solution nmr · 1 distinct chain · 70% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ABromodomain-containing protein 4protein10970% helix, 0% strandO60885

Ligands and binding sites

  • EAM · 2-[(4S)-6-(4-chlorophenyl)-8-methoxy-1-methyl-4H-[1,2,4]triazolo[4,3-a][1,4]benzodiazepin-4-yl]-N-ethylacetamide · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11220.500.8021EAM

Compared structures

  • 7AQT · NMR2 structure of BRD4-BD2 in complex with iBET-762 · the same entry in another collection · chain A against A, TM-score 1.00
  • O60885 · AlphaFold monomer V2.0 prediction for bromodomain-containing protein 4 (O60885) · a predicted model of the same protein · chain A against A, TM-score 0.98

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