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MolNFT v1 · #173122 · protein

Structure of lipase tl from bulk agarose grown crystal

7APN: “Structure of lipase tl from bulk agarose grown crystal”. X-ray diffraction, 3 ligands (NAG, MG, PO4). MolNFT v1 #173122 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7APN
Type
protein
Length
538 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
O59952
Ligands
NAG, MG, PO4

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein269—O59952

Ligands and binding sites

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A, B
  • MG · Magnesium ion · metal · 2 copies · chains A, B
  • PO4 · Phosphate ion · ion · 2 copies · chains A
  • GOL · Glycerol · additive · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7APN · Structure of Lipase TL from bulk agarose grown crystal · the same entry in another collection · chain A against A, TM-score 1.00
  • O59952 · AlphaFold monomer V2.0 prediction for lipase (O59952) · a predicted model of the same protein · chain A against A, TM-score 0.99

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