MolNFT v1 · #173101 · protein
The FK1 domain of FKBP51 in complex with (2'R,5'S,12'R)-12'- cyclohexyl-2'-[2-(3,4-DIMETHOXYPHENYL)ETHYL]-3',19'-dioxa-10',13', 16'-TRIAZASPIRO[CYCLOPROPANE-1,15'- TRICYCLO[18.3.1.0-5, 10]TETRACOSANE]-1'(24'),20',22'-triene-4',11',14',17'-tetrone
7AOU · Peptidyl-prolyl cis-trans isomerase FKBP5: “The FK1 domain of FKBP51 in complex with (2'R,5'S,12'R)-12'…”. X-ray diffraction, 1 ligand (RTT), 1 pocket (best druggability 0.49). MolNFT v1 #173101 on GenesisL1: 3D structure, binding…
- PDB
- 7AOU
- Type
- protein
- Length
- 128 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Peptidyl-prolyl cis-trans isomerase FKBP5
- EC
- 5.2.1.8
- UniProt
- Q13451
- Ligands
- RTT
- Pockets
- 1 · best druggability 0.49
Structure
x-ray diffraction · 1 distinct chain · 14% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptidyl-prolyl cis-trans isomerase FKBP5 (EC 5.2.1.8) | protein | 128 | 14% helix, 34% strand | Q13451 |
Ligands and binding sites
- RTT · (2'R,5'S,12'R)-12'-cyclohexyl-2'-[2-(3,4-dimethoxyphenyl)ethyl]-3',19'-dioxa-10',13',16'-triazaspiro[cyclopropane-1,15'- tricyclo[18.3.1.0-5,10]tetracosane]-1'(24'),20',22'-triene-4',11',14',17'-tetrone · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 150 | 0.49 | 0.78 | 18 | RTT |
Compared structures
- 7AOU · The Fk1 domain of FKBP51 in complex with (2'R,5'S,12'R)-12'-cyclohexyl-2'-[2-(3,4-dimethox… · the same entry in another collection · chain A against A, TM-score 1.00
- Q13451 · AlphaFold monomer V2.0 prediction for peptidyl-prolyl cis-trans isomerase FKBP5 (Q13451) · a predicted model of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q13451
- Elsewhere: RCSB PDB 7AOU · PDBe 7AOU · UniProt Q13451
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.