MolNFT v1 · #172847 · protein
Crystal structure of the metallo-beta-lactamase VIM1 with 1306
7AFY: “Crystal structure of the metallo-beta-lactamase VIM1 with 1306”. X-ray diffraction, 3 ligands (RBW, NA, ZN). MolNFT v1 #172847 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7AFY
- Type
- protein
- Length
- 233 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9XAY4
- Ligands
- RBW, NA, ZN
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 233 | — | Q9XAY4 |
Ligands and binding sites
- RBW · 3-[3-chloranyl-4-(methylsulfonylmethyl)phenyl]-7-propan-2-yl-1~{H}-indole-2-carboxylic acid · ligand · chains A
- NA · Sodium ion · metal · 2 copies · chains A
- ZN · Zinc ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7AFY · Crystal structure of the metallo-beta-lactamase VIM1 with 1306 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9XAY4
- Elsewhere: RCSB PDB 7AFY · PDBe 7AFY · UniProt Q9XAY4
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