MolNFT v1 · #172489 · RNA
RNA duplex with a cytosine bulge in complex with berberine
7A3Y: “RNA duplex with a cytosine bulge in complex with berberine”. Solution nmr, 1 ligand (BER). MolNFT v1 #172489 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7A3Y
- Type
- RNA
- Length
- 25 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- BER
Structure
solution nmr · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | rna | 13 | — | — |
| B | — | rna | 12 | — | — |
Ligands and binding sites
- BER · Berberine · ligand · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7A3Y · RNA duplex with a cytosine bulge in complex with berberine · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7A3Y · PDBe 7A3Y
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