MolNFT v1 · #172470 · protein

Crystal structure of apo DPP9

7A3F: “Crystal structure of apo DPP9”. X-ray diffraction, 1 ligand (PO4). MolNFT v1 #172470 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7A3F
Type: protein
Length: 3,155 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q86TI2
Ligands: PO4

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B	—	protein	782	—	Q86TI2
A	—	protein	794	—	Q86TI2
C	—	protein	791	—	Q86TI2
D	—	protein	788	—	Q86TI2

Ligands and binding sites

PO4 · Phosphate ion · ion · 4 copies · chains B, A, C, D
GOL · Glycerol · additive · 2 copies · chains B, A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7A3F · Crystal structure of apo DPP9 · the same entry in another collection · chain D against D, TM-score 1.00
Q86TI2 · AlphaFold monomer V2.0 prediction for dipeptidyl peptidase 9 (Q86TI2) · a predicted model of the same protein · chain B against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q86TI2
Elsewhere: RCSB PDB 7A3F · PDBe 7A3F · UniProt Q86TI2

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