MolNFT v1 · #172245 · protein
Neisseria gonorrhoeae transaldolase at 1.35 ångström resolution
6ZWJ: “Neisseria gonorrhoeae transaldolase at 1.35 ångström resolution”. X-ray diffraction, 3 pockets (best druggability 0.49). MolNFT v1 #172245 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6ZWJ
- Type
- protein
- Length
- 352 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transaldolase
- EC
- 2.2.1.2
- UniProt
- A0A1D3FXY0
- Pockets
- 3 · best druggability 0.49
Structure
x-ray diffraction · 1 distinct chain · 59% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transaldolase (EC 2.2.1.2) | protein | 352 | 59% helix, 12% strand | A0A1D3FXY0 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 171 | 0.49 | 0.77 | 29 | CIT |
| 2 | 114 | 0.38 | 0.75 | 19 | empty |
| 3 | 58 | 0.30 | 0.75 | 14 | empty |
Modifications
Observed in the structure: 1 modified (oxidation).
Compared structures
- 6ZWJ · Neisseria gonorrhoeae transaldolase at 1.35 Angstrom resolution · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1D3FXY0
- Elsewhere: RCSB PDB 6ZWJ · PDBe 6ZWJ · UniProt A0A1D3FXY0
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