MolNFT v1 · #172227 · protein

X-ray structure of the haloalkane dehalogenase HALOTAG7-P174W labeled with a chloroalkane-tetramethylrhodamine fluorophore substrate

6ZVV: “X-ray structure of the haloalkane dehalogenase HALOTAG7-P174W labeled with a…”. X-ray diffraction, 3 ligands (OEH, CA, CL). MolNFT v1 #172227 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6ZVV
Type: protein
Length: 1,169 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P0A3G3
Ligands: OEH, CA, CL

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, C	—	protein	293	—	P0A3G3
B	—	protein	291	—	P0A3G3
D	—	protein	292	—	P0A3G3

Ligands and binding sites

OEH · [9-[2-carboxy-5-[2-[2-(6-chloranylhexoxy) ethoxy]ethylcarbamoyl]phenyl]-6-(dimethylamino) xanthen-3-ylidene]-dimethyl-azanium · ligand · 4 copies · chains A, B, C, D
CA · Calcium ion · metal · chains B
CL · Chloride ion · ion · 4 copies · chains A, B, C, D
GOL · Glycerol · additive · 2 copies · chains A, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6ZVV · X-ray structure of the haloalkane dehalogenase HALOTAG7-P174W labeled with a… · the same entry in another collection · chain D against D, TM-score 1.00
P0A3G3 · AlphaFold monomer V2.0 prediction for haloalkane dehalogenase (P0A3G3) · a predicted model of the same protein · chain B against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0A3G3
Elsewhere: RCSB PDB 6ZVV · PDBe 6ZVV · UniProt P0A3G3

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