MolNFT v1 · #17221 · protein

Crystal structure of a psychrophilic alkaline protease from pseudomonas tac II 18

1OMJ · Serralysin: “Crystal structure of a psychrophilic alkaline protease from pseudomonas tac II 18”. X-ray diffraction, 3 ligands (CA, ZN, SO4), 1 pocket (best druggability 0.35). MolNFT v1 #17221 on GenesisL1: 3D structure, binding…

PDB: 1OMJ
Type: protein
Length: 456 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Serralysin
EC: 3.4.24.40
UniProt: O69771
Ligands: CA, ZN, SO4
Pockets: 1 · best druggability 0.35

Structure

x-ray diffraction · 1 distinct chain · 19% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Serralysin (EC 3.4.24.40)	protein	456	19% helix, 24% strand	O69771

Ligands and binding sites

CA · Calcium ion · metal · 8 copies · chains A
ZN · Zinc ion · metal · chains A
SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	76	0.35	0.76	17	empty

Compared structures

1OMJ · Crystal structure of a psychrophilic alkaline protease from pseudomonas tac II 18 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O69771
Elsewhere: RCSB PDB 1OMJ · PDBe 1OMJ · UniProt O69771

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