MolNFT v1 · #172201 · protein
Crystal structure of thrombin in complex with COMPOUND42A
6ZUX: “Crystal structure of thrombin in complex with COMPOUND42A”. X-ray diffraction, 2 ligands (QQE, NAG). MolNFT v1 #172201 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6ZUX
- Type
- protein
- Length
- 288 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P00734, P28504
- Ligands
- QQE, NAG
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| L | — | protein | 27 | — | P00734 |
| H | — | protein | 250 | — | P00734 |
| I | — | protein | 11 | — | P28504 |
Ligands and binding sites
- QQE · [2-[[(1~{R})-1-(3-chlorophenyl)ethyl]amino]-7-methoxy-1,3-benzoxazol-5-yl]-[(2~{S},5~{S})-5-(2-hydroxyethyl)-2-methyl-morpholin-4-yl]methanone · ligand · chains H
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6ZUX · Crystal Structure of Thrombin in complex with compound42a · the same entry in another collection · chain L against L, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00734
- Every structure of UniProt P28504
- Elsewhere: RCSB PDB 6ZUX · PDBe 6ZUX · UniProt P00734 · UniProt P28504
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