MolNFT v1 · #172105 · protein
Deciphering the role of the channel constrictions in the opening mechanism of mexab-oprm efflux pump from pseudomonas aeruginosa
6ZRE: “Deciphering the role of the channel constrictions in the opening mechanism of mexab-oprm efflux pump from…”. X-ray diffraction, 2 ligands (PLM, SO4). MolNFT v1 #172105 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6ZRE
- Type
- protein
- Length
- 912 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q51487
- Ligands
- PLM, SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 455 | — | Q51487 |
| B | — | protein | 457 | — | Q51487 |
Ligands and binding sites
- PLM · Palmitic acid · ligand · chains A
- SO4 · Sulfate ion · ion · chains A
- BOG · octyl beta-D-glucopyranoside · additive · 11 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6ZRE · Deciphering the role of the channel constrictions in the opening mechanism of MexAB-OprM… · the same entry in another collection · chain A against A, TM-score 1.00
- Q51487 · AlphaFold monomer V2.0 prediction for outer membrane protein oprm (Q51487) · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q51487
- Elsewhere: RCSB PDB 6ZRE · PDBe 6ZRE · UniProt Q51487
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