MolNFT v1 · #172085 · protein
Crystal structure of the RLIP76 ral binding domain mutant (E427H/Q433L/K440R) in complex with ralb-gmppnp
6ZQT: “Crystal structure of the RLIP76 ral binding domain mutant (E427H/Q433L/K440R) in complex with ralb-gmppnp”. X-ray diffraction, 2 ligands (GNP, MG). MolNFT v1 #172085 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6ZQT
- Type
- protein
- Length
- 452 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P11234, Q15311
- Ligands
- GNP, MG
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 173 | — | P11234 |
| C | — | protein | 51 | — | Q15311 |
| B | — | protein | 171 | — | P11234 |
| D | — | protein | 57 | — | Q15311 |
Ligands and binding sites
- GNP · Phosphoaminophosphonic acid-guanylate ester · ligand · 2 copies · chains A, B
- MG · Magnesium ion · metal · 2 copies · chains A, B
- GOL · Glycerol · additive · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6ZQT · Crystal structure of the RLIP76 Ral binding domain mutant (E427H/Q433L/K440R) in complex… · the same entry in another collection · chain D against D, TM-score 1.00
- P11234 · AlphaFold monomer V2.0 prediction for RAS-related protein ral-B (P11234) · a predicted model of the same protein · chain B against A, TM-score 0.99
- Q15311 · AlphaFold monomer V2.0 prediction for rala-binding protein 1 (Q15311) · a predicted model of the same protein · chain C against A, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P11234
- Every structure of UniProt Q15311
- Elsewhere: RCSB PDB 6ZQT · PDBe 6ZQT · UniProt P11234 · UniProt Q15311
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