MolNFT v1 · #172046 · protein
Cyanophage S-2L hd phosphohydrolase (datz) bound to da and one catalytic ZN2+ ion
6ZPA: “Cyanophage S-2L hd phosphohydrolase (datz) bound to da and one catalytic ZN2+ ion”. X-ray diffraction, 3 ligands (3D1, ZN, LI). MolNFT v1 #172046 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6ZPA
- Type
- protein
- Length
- 173 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- 3D1, ZN, LI
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 173 | — | — |
Ligands and binding sites
- 3D1 · (2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol · ligand · chains A
- ZN · Zinc ion · metal · chains A
- LI · Lithium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6ZPA · Cyanophage S-2L HD phosphohydrolase (DatZ) bound to dA and one catalytic Zn2+ ion · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6ZPA · PDBe 6ZPA
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