MolNFT v1 · #171328 · RNA

Crystal structure of RNA-10MER: CCGG(N4,N4-dimethyl-C)GCCGG; R32 form

6Z18: “Crystal structure of RNA-10MER: CCGG(N4,N4-dimethyl-C)GCCGG; R32 form”. X-ray diffraction. MolNFT v1 #171328 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6Z18
Type: RNA
Length: 20 nucleotides
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: RNA-10MER: CCGG(N4,N4-dimethyl-C)GCCGG

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	RNA-10MER: CCGG(N4,N4-dimethyl-C)GCCGG	rna	10	—	—

Interfaces

1 interface between chains.

A–B · 566 Å² buried · 57 hydrogen bonds · nucleic-nucleic

Modifications

Observed in the structure: 2 modified (nucleotide modification).

Compared structures

6Z18 · Crystal structure of RNA-10mer: CCGG(N4,N4-dimethyl-C)GCCGG; R32 form · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 6Z18 · PDBe 6Z18

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