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Crystal structure of RNA-10MER: CCGG(N4,N4-dimethyl-C)GCCGG; R32 form

Analyse Crystal structure of RNA-10MER: CCGG(N4,N4-dimethyl-C)GCCGG; R32 form in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6Z18
Type
RNA
Length
20 nucleotides
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
RNA-10MER: CCGG(N4,N4-dimethyl-C)GCCGG

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BRNA-10MER: CCGG(N4,N4-dimethyl-C)GCCGGrna10——

Interfaces

1 interface between chains.

  • A–B · 566 Ų buried · 57 hydrogen bonds · nucleic-nucleic

Modifications

Observed in the structure: 2 modified (nucleotide modification).

Compared structures

  • 6Z18 · Crystal structure of RNA-10mer: CCGG(N4,N4-dimethyl-C)GCCGG; R32 form · the same entry in another collection · chain A against A, TM-score 1.00

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