MolNFT v1 · #171148 · protein
Structure of the wnt deacylase notum in complex with a pyrrolidine-3- carboxylic acid fragment 587
6YV0: “Structure of the wnt deacylase notum in complex with a pyrrolidine-3- carboxylic acid fragment 587”. X-ray diffraction, 3 ligands (PQT, NAG, SO4). MolNFT v1 #171148 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YV0
- Type
- protein
- Length
- 359 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q6P988
- Ligands
- PQT, NAG, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 359 | — | Q6P988 |
Ligands and binding sites
- PQT · (3~{R})-1-(2-chlorophenyl)pyrrolidine-3-carboxylic acid · ligand · chains A
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A
- SO4 · Sulfate ion · ion · chains A
- EDO · 1,2-ethanediol · additive · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YV0 · Structure of the wnt deacylase notum in complex with a pyrrolidine-3-carboxylic acid… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6P988
- Elsewhere: RCSB PDB 6YV0 · PDBe 6YV0 · UniProt Q6P988
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