MolNFT v1 · #171016 · protein

Crystal structure of native phycocyanin from T. elongatus in spacegroup P63 at 1.8 ångströms

6YQ8: “Crystal structure of native phycocyanin from T. elongatus in spacegroup P63 at 1.8 ångströms”. X-ray diffraction, 1 ligand (CYC). MolNFT v1 #171016 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6YQ8
Type: protein
Length: 334 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P50032, P50033
Ligands: CYC

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	162	—	P50032
B	—	protein	172	—	P50033

Ligands and binding sites

CYC · Phycocyanobilin · ligand · 3 copies · chains A, B
EDO · 1,2-ethanediol · additive · 7 copies · chains A, B
PGE · Triethylene glycol · additive · 4 copies · chains A, B
GOL · Glycerol · additive · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6YQ8 · Crystal structure of native Phycocyanin from T. elongatus in spacegroup P63 at 1.8… · the same entry in another collection · chain A against A, TM-score 1.00
P50033 · AlphaFold monomer V2.0 prediction for C-phycocyanin beta subunit (P50033) · a predicted model of the same protein · chain B against A, TM-score 1.00
P50032 · AlphaFold monomer V2.0 prediction for C-phycocyanin alpha subunit (P50032) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P50032
Every structure of UniProt P50033
Elsewhere: RCSB PDB 6YQ8 · PDBe 6YQ8 · UniProt P50032 · UniProt P50033

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