MolNFT v1 · #170916 · protein
Structure of E. COLI PBP1B with a ftsn peptide activating transglycosylase activity
6YN0: “Structure of E. COLI PBP1B with a ftsn peptide activating transglycosylase activity”. X-ray diffraction, 1 ligand (M0E). MolNFT v1 #170916 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YN0
- Type
- protein
- Length
- 702 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P02919, P29131
- Ligands
- M0E
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 689 | — | P02919 |
| B | — | protein | 13 | — | P29131 |
Ligands and binding sites
- M0E · Moenomycin · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YN0 · Structure of E. coli PBP1b with a FtsN peptide activating transglycosylase activity · the same entry in another collection · chain A against A, TM-score 1.00
- P02919 · AlphaFold monomer V2.0 prediction for penicillin-binding protein 1B (P02919) · a predicted model of the same protein · chain A against A, TM-score 0.99
- P29131 · AlphaFold monomer V2.0 prediction for cell division protein ftsn (P29131) · a predicted model of the same protein · chain B against A, TM-score 0.60
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02919
- Every structure of UniProt P29131
- Elsewhere: RCSB PDB 6YN0 · PDBe 6YN0 · UniProt P02919 · UniProt P29131
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