MolNFT v1 · #170883 · protein
Translation initiation factor 4E in complex with 4-cl-BN7GPPPG mRNA 5' cap analog
6YLV: “Translation initiation factor 4E in complex with 4-cl-BN7GPPPG mRNA 5' cap analog”. X-ray diffraction, 1 ligand (OYW). MolNFT v1 #170883 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YLV
- Type
- protein
- Length
- 725 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P63073
- Ligands
- OYW
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 183 | — | P63073 |
| B | — | protein | 185 | — | P63073 |
| C | — | protein | 179 | — | P63073 |
| D | — | protein | 178 | — | P63073 |
Ligands and binding sites
- OYW · 4-Cl-Bn7GpppG mRNA 5' cap analog · ligand · 4 copies · chains A, B, C, D
- GOL · Glycerol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YLV · Translation initiation factor 4E in complex with 4-Cl-Bn7GpppG mRNA 5' cap analog · the same entry in another collection · chain D against D, TM-score 1.00
- P63073 · AlphaFold monomer V2.0 prediction for eukaryotic translation initiation factor 4E (P63073) · a predicted model of the same protein · chain C against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P63073
- Elsewhere: RCSB PDB 6YLV · PDBe 6YLV · UniProt P63073
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