MolNFT v1 · #170877 · protein
EGFP_IN_ACIDIC_ENV directionality of optical properties of fluorescent proteins
6YLP: “EGFP_IN_ACIDIC_ENV directionality of optical properties of fluorescent proteins”. X-ray diffraction, 2 ligands (GYS, PO4). MolNFT v1 #170877 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YLP
- Type
- protein
- Length
- 226 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- GYS, PO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 226 | — | — |
Ligands and binding sites
- GYS · [(4Z)-2-(1-amino-2-hydroxyethyl)-4-(4-hydroxybenzylidene)-5-oxo-4,5-dihydro-1H-imidazol-1-yl]acetic acid · ligand · chains A
- PO4 · Phosphate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YLP · EGFP_in_Acidic_env Directionality of Optical Properties of Fluorescent Proteins · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6YLP · PDBe 6YLP
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