GL1X · GenesisL1 explorer

Ligand · GYS

GYS · [(4Z)-2-(1-amino-2-hydroxyethyl)-4-(4-hydroxybenzylidene)-5-oxo-4,5-dihydro-1H-imidazol-1-yl]acetic acid

GYS, [(4Z)-2-(1-amino-2-hydroxyethyl)-4-(4-hydroxybenzylidene)-5-oxo-4,5-dihydro-1H-imidazol-1-yl]acetic acid (C14 H15 N3 O5, 305.3 g/mol), in the MolNFT structures on GenesisL1: bound in 11 records (11 PDB entries). Every binding site…

Component
GYS
Formula
C14 H15 N3 O5
Class
ligand
Structures
11
PDB entries
11

Binding sites

GYS in 11 structures; the first of them:

  • 6B7R · Truncated strand 11-less green fluorescent protein · GYS B66 · binds HIS-17, HIS-15, LEU42, LEU44, VAL61, THR62, THR63, LEU64 and 12 more
  • 6B7T · Truncated strand 10-less green fluorescent protein · GYS A96 · binds HIS-14, SER-12, LEU7, GLU9, LEU72, VAL91, THR92, THR93 and 12 more
  • 6FLL · Spectroscopic and structural study of qw, a egfp mutant showing photoswitching properties · GYS A1066 · binds LEU1042, VAL1061, THR1062, THR1063, LEU1064, VAL1068, GLN1069, GLN1094 and 12 more
  • 6ITC · Structure of a substrate engaged seca-secy protein translocation machine · GYS G66 · binds VAL61, THR62, THR63, PHE64, VAL68, GLN69, ARG96, ASN121 and 5 more
  • 6JGH · Crystal structure of the F99S/M153T/V163A/T203I variant of GFP at 0.94 a · GYS A66 · binds LEU42, VAL61, THR62, THR63, PHE64, VAL68, GLN69, GLN94 and 11 more
  • 6JGJ · Crystal structure of the F99S/M153T/V163A/E222Q variant of GFP at 0.78 a · GYS A66 · binds LEU42, VAL61, THR62, THR63, PHE64, VAL68, GLN69, GLN94 and 11 more
  • 6L27 · X-ray crystal structure of the mutant green fluorescent protein · GYS A66 · binds LEU42, LEU44, VAL61, THR62, THR63, LEU64, VAL68, GLN69 and 12 more
  • 6OFO · Crystal structure of split green fluorescent protein (GFP); S10 circular permutant… · GYS A128 · binds THR13, THR15, LEU39, GLU41, LEU104, LEU106, VAL123, THR124 and 10 more
  • 6YLP · EGFP_IN_ACIDIC_ENV directionality of optical properties of fluorescent proteins · GYS A66 · binds LEU43, VAL62, THR63, THR64, LEU65, VAL68, GLN69, GLN94 and 11 more
  • 7C03 · Crystal structure of POLARISACT(T57S), genetically encoded probe for fluorescent… · GYS A57 · binds LEU34, VAL53, THR54, THR55, LEU56, VAL60, GLN61, GLN86 and 10 more
  • 7LG4 · Green fluorescent protein from aequorea macrodactyla - amacgfp · GYS A66 · binds LEU42, VAL61, THR62, THR63, LEU64, ILE68, LEU69, GLN94 and 10 more

Residues it binds most

VAL 14, THR 14, LEU 13, GLN 14, PHE 14, HIS 14, ASN 14, ARG 14, GLU 9, ILE 5 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ADP · Adenosine-5'-diphosphate
  • BEF · Beryllium trifluoride ion
  • PGV · (1R)-2-{[{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11E)-octadec-11-enoate
  • CL · Chloride ion
  • PO4 · Phosphate ion
  • EDO · 1,2-ethanediol
  • GOL · Glycerol
  • NHE · 2-[N-cyclohexylamino]ethane sulfonic acid
  • PEG · Di(hydroxyethyl)ether

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.